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Name

RESTOVER

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Status The current release has 0 entries and was indexed 19-Sep-2004.
Creation date Written (Jan 2001) - Bernd Jagla
Description RESTOVER application details page

Finds restriction enzymes that produce a specific overhang

The Restriction Enzyme database (REBASE) is a collection of informationabout restriction enzymes and related proteins. It contains publishedand unpublished references, recognition and cleavage sites,isoschizomers, commercial availability, methylation sensitivity, crystaland sequence data. DNA methyltransferases, homing endonucleases,nicking enzymes, specificity subunits and control proteins are alsoincluded. Most recently, putative DNA methyltransferases andrestriction enzymes, as predicted from analysis of genomic sequences,are also listed.

The home page of REBASE is: http://rebase.neb.com/

restover takes a specified sequence and a short sequence of acut-site overhang and searches the REBASE database for matching enzymesthat create the desired overhang sequence when they cut theinput sequence.

Literature None.
WWW www.hgmp.mrc.ac.uk/Software/EMBOSS/Apps/restover.html
Ftp The latest version of the EMBOSS package is available on ftp://ftp.uk.embnet.org/pub/EMBOSS/
Contact This application was written by Bernd Jaglabernd@golgi.ski.mskcc.org
Cellular Biochemistry and Biophysics Program, RockefellerResearch Laboratories, Memorial Sloan-Kettering Cancer Center, 1275 YorkAvenue, Box 251,New York, NY 10021.
See also
RECODER Remove restriction sites but maintain the same translation
REMAP Display a sequence with restriction cut sites, translation etc..
RESTRICT Finds restriction enzyme cleavage sites
SHOWSEQN Display a sequence with features, translation etc..
SILENT Silent mutation restriction enzyme scan
Data-fields in SRS
Field Name
Short Name
Type
No. of Keys
No. of Entry References
Indexing Date
Status
ID id id 0 0   not indexed
JobName jnm index 0 0   not indexed
Loaders
EMBOSSDNASIMPLESEQ
EMBOSSPROTSIMPLESEQ
SRS Description Structure ( srsgen.i , srsdb.i , href.i )
Syntax
Information
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