Chromosome 4
| ILP Name | cDNA name | Japanica accession number | BAC clone name | Japanica start | Japanica end | Length on Japanica | Indica Scaffold | Indica start | Indica end | Length on Indinca | Difference between Japanica and Indica | Genetic distance based on RFLP map | Forward primer | Reverse primer |
| RI05745 | 001-204-H07 | AL662935 | OSJNBa0094O15 | 120988bp | 121233bp | 245bp | Scaffold004604 | 16194bp | 16440bp | 246bp | -1bp | 3.1cM | TCAAGTTCTTCAACGCCAGA | CATGTTCATGGGAAGCGACT |
| RI05746 | 001-204-H07 | AL662935 | OSJNBa0094O15 | 121271bp | 121671bp | 400bp | Scaffold004604 | 15753bp | 16156bp | 403bp | -3bp | 3.1cM | ATTCACTCGGCGGTGTCTAC | TTCTGACAGCTCAACCATGC |
| RI05658 | 002-174-C02 | AL606620 | OSJNBb0085F13 | 101147bp | 101668bp | 521bp | Scaffold004634 | 13259bp | 13744bp | 485bp | 36bp | 3.8-5.1cM | GAGTCCGTGGACTGGAGAAA | GCTCTTGCTCCGACAGAGATA |
| RI05770 | J013130G18 | AL662992 | OSJNBb0004G23 | 40428bp | 40952bp | 524bp | Scaffold007502 | 15404bp | 15929bp | 525bp | -1bp | 3.8cM | CTGGAACAGAACCAGACCTTG | CACCTTTAGGCGCTTCTTGA |
| RI05771 | J013130G18 | AL662992 | OSJNBb0004G23 | 41455bp | 41727bp | 272bp | Scaffold007502 | 16432bp | 16703bp | 271bp | 1bp | 3.8cM | TCGCTTCTGATTTTGGGTTT | CGCTCGATTCCATAGCTTTT |
| RI05772 | J013130G18 | AL662992 | OSJNBb0004G23 | 41691bp | 42336bp | 645bp | Scaffold007502 | 16667bp | 17310bp | 643bp | 2bp | 3.8cM | CACCTCTCGCTTCCAATCTT | CCAGCACTCAAATGAGCAAA |
| RI05773 | 001-031-D03 | AL662992 | OSJNBb0004G23 | 73719bp | 74130bp | 411bp | Scaffold001664 | 21927bp | 22339bp | 412bp | -1bp | 3.8cM | TGGTGATGTCCCCATACAAG | GAATGTCAACAGGTCCACCA |
| RI05662 | J013002E01 | AL606642 | OSJNBa0027H06 | 141612bp | 142231bp | 619bp | Scaffold001261 | 36982bp | 37593bp | 611bp | 8bp | 5.1cM | CTCCTGTACCATCAGGCATTC | TGGATAGCTTGCATTTCCTG |
| RI05663 | 001-117-G02 | AL606642 | OSJNBa0027H06 | 5264bp | 5505bp | 241bp | Scaffold013209 | 3809bp | 4053bp | 244bp | -3bp | 5.1cM | AGCCCTCCAAGACTCTCTCC | ACTGCCCGATCATGCTCAC |
| RI05649 | J033005K19 | AL606612 | OSJNBb0021I10 | 20647bp | 21570bp | 923bp | Scaffold003284 | 21929bp | 22866bp | 937bp | -14bp | 5.4cM | TGTTGGTCCATATTCGGATG | CCTGGTAGTCATGTCACTGCTC |
| RI05731 | J023055J24 | AL606992 | OSJNBa0073L13 | 120083bp | 120675bp | 592bp | Scaffold007815 | 7443bp | 8043bp | 600bp | -8bp | 5.4-6.5cM | CCCTTCAAATCAGGATCAGC | TCGTCACTTTCATTGCCAAA |
| RI05732 | 001-114-D01 | AL606992 | OSJNBa0073L13 | 4855bp | 5606bp | 751bp | Scaffold006723 | 9123bp | 9885bp | 762bp | -11bp | 5.4-6.5cM | GGACGGTTTCCAGAAGACAA | AGGGGATTTTACATGGTTGC |
| RI05661 | J023009K15 | AL606631 | OSJNBb0050O03 | 114723bp | 114959bp | 236bp | Scaffold005545 | 1445bp | 1682bp | 237bp | -1bp | 6.5cM | AGTGGAAATGTGAGCTCTTGC | TGTGTACCCAAAAATCGACAA |
| RI05622 | 001-016-A05 | AL606450 | OSJNBa0020P07 | 3254bp | 3935bp | 681bp | Scaffold005545 | 14570bp | 15250bp | 680bp | 1bp | 6.8cM | ATGGACGAGATGGCCTACAG | CAGCTGAACCACTGGAGGAT |
| RI05623 | J023012M21 | AL606450 | OSJNBa0020P07 | 65776bp | 66654bp | 878bp | Scaffold006991 | 16594bp | 17419bp | 825bp | 53bp | 6.8cM | GTCTCCTCCGACGTGCTC | TCGAAAATACGGCCAAGAAC |
| RI05754 | J013094J05 | AL662964 | OSJNBa0027H09 | 144094bp | 144347bp | 253bp | Scaffold003431 | 20623bp | 20860bp | 237bp | 16bp | 7.1-7.9cM | TTCCACGAACACAGATTGGA | CCAAGAGGTCATCAGGCAAC |
| RI05755 | 001-117-D07 | AL662964 | OSJNBa0027H09 | 39593bp | 40024bp | 431bp | Scaffold004717 | 17589bp | 18018bp | 429bp | 2bp | 7.1-7.9cM | GTCGCAGAATTGCAGTGAGA | GCCATGACTTTCTTGTTGAGG |
| RI05756 | J033099P12 | AL662964 | OSJNBa0027H09 | 7546bp | 8159bp | 613bp | Scaffold001559 | 2497bp | 3113bp | 616bp | -3bp | 7.1-7.9cM | CTTTGGGCTACGGAGGAAAT | GCAATGTGAGCACCTGTAGC |
| RI05779 | 002-100-C05 | AL663011 | OSJNBb0080H08 | 108674bp | 109734bp | 1060bp | Scaffold000489 | 46605bp | 47659bp | 1054bp | 6bp | 7.1-7.9cM | TGCTTTCTTGATCTTGCTTCC | CCCCAACCTTTGTTGATGAT |
| RI05780 | 002-100-C05 | AL663011 | OSJNBb0080H08 | 125569bp | 125851bp | 282bp | Scaffold000489 | 64100bp | 64381bp | 281bp | 1bp | 7.1-7.9cM | GGCAACCCATGCAAACTTTA | CACGCAGGTAGCAAAGAGAAT |
| RI05767 | 001-124-H09 | AL662985 | OSJNBa0095H06 | 41451bp | 41831bp | 380bp | Scaffold002619 | 15744bp | 16551bp | 807bp | -427bp | 7.9cM | GCCTACATCGCCGACTTC | ACCCCGTAGCTGTACACGTC |
| RI05800 | J013082B01 | AL731627 | OSJNBa0095E20 | 30227bp | 30969bp | 742bp | Scaffold010049 | 4008bp | 4751bp | 743bp | -1bp | 8.7cM | CTCTGACACCCGAGAAGACTG | CCTCCAAAGCCTTGAATACG |
| RI05724 | J013109K19 | AL606654 | OSJNBb0028M18 | 100765bp | 101720bp | 955bp | Scaffold000051 | 77206bp | 78157bp | 951bp | 4bp | 10.1-11.0cM | AACACAAGCGGAGTCTGAGG | TTCCTTGATTTCCCAAATGC |
| RI05725 | J013109K19 | AL606654 | OSJNBb0028M18 | 99913bp | 100726bp | 813bp | Scaffold000051 | 78195bp | 78987bp | 792bp | 21bp | 10.1-11.0cM | CACATGATCTGTTCCACTACGAA | ACGCGCAACCGGAAGTAT |
| RI05749 | J033092L14 | AL662959 | OSJNBa0019G23 | 146213bp | 146841bp | 628bp | Scaffold000610 | 31720bp | 32344bp | 624bp | 4bp | 11.3cM | AGCCAAGAGTTCGGCATACA | TTTGATGGATTGGGGTTCAT |
| RI05750 | 002-135-E09 | AL662959 | OSJNBa0019G23 | 19976bp | 20833bp | 857bp | Scaffold000912 | 9384bp | 10244bp | 860bp | -3bp | 11.3cM | CCTGCAGGGTGCAGATTATT | CAGCTGTTGGTGAAGCTGAA |
| RI05751 | J023098P11 | AL662959 | OSJNBa0019G23 | 43020bp | 43675bp | 655bp | Scaffold007118 | 8969bp | 9665bp | 696bp | -41bp | 11.3cM | CCGACCCTTTCGTAGCTTTC | TGCCCTATAGGAGGCATCTG |
| RI05752 | 001-103-F08 | AL662959 | OSJNBa0019G23 | 52787bp | 53179bp | 392bp | Scaffold004806 | 918bp | 1308bp | 390bp | 2bp | 11.3cM | CCTTGGAGTCCCAACAAGGT | GTATCTGCCGGATCTCCTGA |
| RI05753 | J033095I16 | AL662959 | OSJNBa0019G23 | 57710bp | 58527bp | 817bp | Scaffold004806 | 5836bp | 6652bp | 816bp | 1bp | 11.3cM | GGTCCTCACCTCATCACTGG | GCAGCAACTGTGTTAGCTCCT |
| RI05777 | J023048C17 | AL663013 | OSJNBb0089K06 | 100987bp | 101348bp | 361bp | Scaffold004113 | 8531bp | 8894bp | 363bp | -2bp | 12.2cM | CGAGAACCCTCGTCTCGTAG | GAGCTTGCTGGAGCTGTCC |
| RI05778 | J023048C17 | AL663013 | OSJNBb0089K06 | 103093bp | 103642bp | 549bp | Scaffold004113 | 6240bp | 6788bp | 548bp | 1bp | 12.2cM | TTGAGTTCGTCATCCAGTCG | ATGCTGCAGCTGGAACTGA |
| RI05785 | J033061P03 | AL731589 | OSJNBa0039G19 | 65887bp | 66658bp | 771bp | Scaffold004143 | 17214bp | 17986bp | 772bp | -1bp | 13.1-14.3cM | TGGCTAAAATTTGGCTTGGA | GGCCACTAGCATCACAATGA |
| RI05740 | 001-207-B04 | AL662936 | OSJNBa0052P16 | 52268bp | 52675bp | 407bp | Scaffold005642 | 19072bp | 19378bp | 306bp | 101bp | 14.3-16.7cM | AAAAGCACTTCTCGGACAGC | CCGTGCTTCACGAACAGC |
| RI05741 | 001-131-B02 | AL662936 | OSJNBa0052P16 | 94218bp | 94720bp | 502bp | Scaffold005256 | 19633bp | 20134bp | 501bp | 1bp | 14.3-16.7cM | ATCTCTGGGAGGACATCGTG | TCGCCTCTTTAGCCTCTTCT |
| RI05742 | 001-131-B02 | AL662936 | OSJNBa0052P16 | 95464bp | 95723bp | 259bp | Scaffold005256 | 20878bp | 21134bp | 256bp | 3bp | 14.3-16.7cM | CGTGCCATGTCAATGAAGAT | GGCAGCAGCAGAGAGATAGC |
| RI05743 | 001-131-B02 | AL662936 | OSJNBa0052P16 | 96808bp | 97356bp | 548bp | Scaffold005256 | 22219bp | 22768bp | 549bp | -1bp | 14.3-16.7cM | GCCATTAAGATGGGTTTGGA | CCAATCCACCATGCTTTCTT |
| RI05744 | J023085D09 | AL662939 | OSJNBb0013J13 | 42233bp | 43088bp | 855bp | Scaffold010193 | 4596bp | 5447bp | 851bp | 4bp | 14.3-16.7cM | TGGAGACATCACGCAAGTTC | CCTCAGTCAGGCACACGTT |
| RI05768 | 001-111-D06 | AL662994 | OSJNBb0006L01 | 59035bp | 59367bp | 332bp | Scaffold006990 | 7434bp | 7769bp | 335bp | -3bp | 14.3-16.7cM | GTGGAGAGAGAGGTCGATGG | GGGGGTGACTTTCTTGATGA |
| RI05769 | J023114H04 | AL662994 | OSJNBb0006L01 | 85915bp | 86478bp | 563bp | Scaffold007745 | 5025bp | 5589bp | 564bp | -1bp | 14.3-16.7cM | GAACGGGTACAGGTCCAGTG | AACGTTCCCAATTGACATCAG |
| RI05687 | J033046O13 | AL606667 | OSJNBa0061C06 | 21771bp | 22462bp | 691bp | Scaffold006948 | 12461bp | 13150bp | 689bp | 2bp | 16.7-18.3cM | GACCCACCGACCCTTAACTT | GGCAGCTAGCACGAGTTCAT |
| RI05761 | J023080I03 | AL662965 | OSJNBa0040D17 | 106133bp | 106542bp | 409bp | Scaffold000674 | 11218bp | 11629bp | 411bp | -2bp | 16.7-18.3cM | TTCTGTCCCCGTGGTCTTAC | CGGCTGGACAGAACATCTCT |
| RI05762 | J033072G13 | AL662965 | OSJNBa0040D17 | 140057bp | 140677bp | 620bp | Scaffold000674 | 44800bp | 45421bp | 621bp | -1bp | 16.7-18.3cM | TTCCTCGGCCAGAGTTTTTA | CCTCTGTATGCCATTGAGTCC |
| RI05763 | J033072G13 | AL662965 | OSJNBa0040D17 | 143414bp | 143887bp | 473bp | Scaffold000674 | 48158bp | 48632bp | 474bp | -1bp | 16.7-18.3cM | GGCCCTTTCTCTGTATGCTG | GATCGTATCACGATGCTGGA |
| RI05650 | J013002A21 | AL606606 | OSJNBb0005B05 | 79378bp | 80362bp | 984bp | Scaffold005105 | 6804bp | 7781bp | 977bp | 7bp | 18.3cM | GATTCACCAACCCTTCTCCTC | GTGATGCAGATGCTTGATGG |
| RI05730 | J023087C13 | AL606994 | OSJNBa0035O13 | 132266bp | 133118bp | 852bp | Scaffold004479 | 9258bp | 10109bp | 851bp | 1bp | 18.3-19.6cM | GCCAGGGCAGTTTATCAAAA | TGCAAGAAATCCACTTGGTG |
| RI05646 | 001-117-B05 | AL606601 | OSJNBa0055H05 | 105917bp | 106399bp | 482bp | Scaffold001561 | 17237bp | 17717bp | 480bp | 2bp | 19.6cM | AATCATGGCAGGGTCTGTCT | CCAAAATCTCAAGCGGAAGA |
| RI05647 | J023142I15 | AL606601 | OSJNBa0055H05 | 141365bp | 141611bp | 246bp | Scaffold001561 | 39218bp | 39465bp | 247bp | -1bp | 19.6cM | GCATTCGTCCAAGTTAGCATC | AGCGGATGAGACCAACCTT |
| RI05659 | 001-012-D11 | AL606634 | OSJNBb0072N21 | 78772bp | 79492bp | 720bp | Scaffold007052 | 14492bp | 15215bp | 723bp | -3bp | 19.6cM | CTGAGAGCATTTCCAGAGATCA | GGCAGGCTTCAAATTACCTG |
| RI05728 | J023064M18 | AL606991 | OSJNBa0032B23 | 59783bp | 60462bp | 679bp | Scaffold004390 | 9477bp | 10157bp | 680bp | -1bp | 19.6cM | GGCTGGGCGTATCTTATCAA | TGGAATTTGCACAGATCACAA |
| RI05729 | 001-131-H07 | AL606991 | OSJNBa0032B23 | 87644bp | 88564bp | 920bp | Scaffold000155 | 74324bp | 75249bp | 925bp | -5bp | 19.6cM | CTCACCAGCCAGCTCAATC | CAGATCGAGTAGCACCACCA |
| RI05774 | 006-210-G02 | AL662993 | OSJNBb0015G09 | 102736bp | 103613bp | 877bp | Scaffold004923 | 15295bp | 16171bp | 876bp | 1bp | 19.6cM | AGCAATGCCTTCATTTCCTG | AATTGGCTTCCCCAATGAC |
| RI05788 | J023118N19 | AL731598 | OSJNBa0065B15 | 10607bp | 11501bp | 894bp | Scaffold006469 | 6066bp | 6961bp | 895bp | -1bp | 19.6cM | TTGGAAGTGCTCATCCACTG | TTTTGCATGCCTCTTGTTCA |
| RI05789 | 001-017-A07 | AL731598 | OSJNBa0065B15 | 1064bp | 1675bp | 611bp | Scaffold006469 | 15880bp | 16489bp | 609bp | 2bp | 19.6cM | ATGTGCTTTAGCCGTGATGG | ACGACGTTCCTGTGTCGAA |
| RI05790 | J023021L06 | AL731598 | OSJNBa0065B15 | 56289bp | 56934bp | 645bp | Scaffold003491 | 22559bp | 23225bp | 666bp | -21bp | 19.6cM | ACCGTCATCAGCACGTCTC | GCCGTTGACCTTGAGCAG |
| RI05791 | J023118N19 | AL731598 | OSJNBa0065B15 | 9330bp | 9587bp | 257bp | Scaffold006469 | 7978bp | 8236bp | 258bp | -1bp | 19.6cM | GACCATCACAAGTACCTGGACA | AGGCACTGAATTACTGCATGTT |
| RI05801 | 006-302-B10 | AL731636 | OSJNBb0093G06 | 91682bp | 91878bp | 196bp | Scaffold005956 | 6244bp | 6441bp | 197bp | -1bp | 19.6cM | GGTGGCATGATCTTCATCCT | GAATCACCGACACCTTCCTC |
| RI05660 | 001-208-H09 | AL606602 | OSJNBb0056F09 | 129588bp | 130309bp | 721bp | Scaffold005213 | 14748bp | 15470bp | 722bp | -1bp | 19.9cM | TCCTGAGGGAAGGCTTCATA | TTTTCCTCTAGGGTGCCAAG |
| RI05748 | J023092N19 | AL662955 | OSJNBa0019J05 | 135047bp | 135315bp | 268bp | Scaffold001634 | 15299bp | 15563bp | 264bp | 4bp | 19.9cM | CGCCTCAAGAAGAGGATCAG | GACCATGCCGACGAGGTA |
| RI05759 | 001-124-B01 | AL662962 | OSJNBa0029L02 | 16700bp | 17277bp | 577bp | Scaffold003216 | 7982bp | 8561bp | 579bp | -2bp | 19.9-20.9cM | GCAAAGATTGAGATGCTGGA | TGAAAAATGCAGCTCAATGC |
| RI05760 | 001-124-B01 | AL662962 | OSJNBa0029L02 | 17213bp | 17623bp | 410bp | Scaffold003216 | 8497bp | 8908bp | 411bp | -1bp | 19.9-20.9cM | ATAATGCAGGGATTGCGTTT | AAGCAACTATCACAACCCTTCC |
| RI05781 | J033029C15 | AL731585 | OSJNBa0009K15 | 25729bp | 26633bp | 904bp | Scaffold002149 | 16310bp | 17233bp | 923bp | -19bp | 19.9cM | AACTGCAGCTGCTGGTATCC | CGCCTTGTGCTTCATCTTCT |
| RI05782 | J033029C15 | AL731585 | OSJNBa0009K15 | 34668bp | 35193bp | 525bp | Scaffold002149 | 25385bp | 25911bp | 526bp | -1bp | 19.9cM | TGGTAGCCTTGAGCCTTCAC | AACGTGATTGCCGTTTTGAT |
| RI05784 | 006-306-G03 | AL731595 | OSJNBa0041M21 | 131407bp | 132126bp | 719bp | Scaffold007776 | 11449bp | 12166bp | 717bp | 2bp | 19.9-20.9cM | AGGGCAGGTTGTATTCCAAA | CATGGTACTGCGTCAACCTG |
| RI05794 | J023139N16 | AL731615 | OSJNBa0065J03 | 115625bp | 115894bp | 269bp | Scaffold001535 | 6785bp | 7050bp | 265bp | 4bp | 19.9cM | GGCGATAAGCTCGAAGGTG | TAGGTGACGATGAGCATGGA |
| RI05799 | 002-152-D12 | AL731614 | OSJNBa0079F16 | 34688bp | 35731bp | 1043bp | Scaffold003535 | 15765bp | 16862bp | 1097bp | -54bp | 19.9cM | GTGGCTCTACACGGAGATGG | TGCCAGTTCAGTTGCCTTC |
| RI05795 | J033114E21 | AL731609 | OSJNBa0079M09 | 119999bp | 120716bp | 717bp | Scaffold009918 | 4580bp | 5296bp | 716bp | 1bp | 23.3cM | GGCCTCATTGTCTTCTCCTG | CTCTGACATTGGGTTCAGCA |
| RI05796 | J033114E21 | AL731609 | OSJNBa0079M09 | 120697bp | 121473bp | 776bp | Scaffold009918 | 5277bp | 6058bp | 781bp | -5bp | 23.3cM | TGCTGAACCCAATGTCAGAG | TGGAATGTAGGCTCATCTCAAC |
| RI05797 | J033114E21 | AL731609 | OSJNBa0079M09 | 121433bp | 121816bp | 383bp | Scaffold009918 | 6018bp | 6402bp | 384bp | -1bp | 23.3cM | GCAGCTTCTCCAGAACCAAG | GTTGCGTTGATGAGCAATGT |
| RI05798 | J033114E21 | AL731609 | OSJNBa0079M09 | 121999bp | 122708bp | 709bp | Scaffold009918 | 6585bp | 7373bp | 788bp | -79bp | 23.3cM | TCGAGTACACCCCGTGATTC | GCTAGCTTTTCTTGCGCTTG |
| RI05739 | 001-113-F06 | AL662942 | OSJNBa0033H08 | 111509bp | 112257bp | 748bp | Scaffold004762 | 11872bp | 12621bp | 749bp | -1bp | 24.1cM | GCATCCAAGCTGAGTTTCAA | CGACAAGCTTCTCCTTCTCAA |
| RI05775 | J013078J21 | AL663007 | OSJNBb0054B09 | 20232bp | 20486bp | 254bp | Scaffold002990 | 25937bp | 26193bp | 256bp | -2bp | 24.1cM | CTCCCCGACGACTTCGACT | CTGAGCACCTCCAGCTTCC |
| RI05776 | J013078J21 | AL663007 | OSJNBb0054B09 | 20468bp | 21534bp | 1066bp | Scaffold002990 | 24891bp | 25955bp | 1064bp | 2bp | 24.1cM | GGAAGCTGGAGGTGCTCAG | GAGGTAGCTGAAGGCTGTGG |
| RI05643 | 001-040-A04 | AL606589 | OSJNBa0008A08 | 92644bp | 93366bp | 722bp | Scaffold001722 | 4325bp | 5308bp | 983bp | -261bp | 24.9cM | AGACCATGATTTTCGCAAGG | GACGGTGTGCATCCTTTTCT |
| RI05757 | J033138G07 | AL662963 | OSJNBa0020I02 | 104907bp | 105792bp | 885bp | Scaffold003461 | 14584bp | 15476bp | 892bp | -7bp | 28.6cM | CTGGGAGCTAAACCCTAGCC | AAAGCAAAGCCAGGTTGAGA |
| RI05758 | J033091K14 | AL662963 | OSJNBa0020I02 | 63157bp | 63684bp | 527bp | Scaffold006354 | 16238bp | 16766bp | 528bp | -1bp | 28.6cM | CTCGACGGCATCGACTTC | TCAGCCACACCTTCTTACCC |
| RI05783 | 006-207-G03 | AL731587 | OSJNBa0016N04 | 45316bp | 46001bp | 685bp | Scaffold012536 | 470bp | 1177bp | 707bp | -22bp | 30.8-41.5cM | CGGCTACACCTTCCTCTCC | GTGTTCATGCCAGAATGCAG |
| RI05786 | J013151C04 | AL731588 | OSJNBa0038P21 | 22105bp | 22811bp | 706bp | Scaffold000135 | 89716bp | 90426bp | 710bp | -4bp | 30.8cM | AAGTTGATGCTGCCCCATT | CAGAGTGCGAGTTTGCTGAC |
| RI05787 | J013151C04 | AL731588 | OSJNBa0038P21 | 22961bp | 23884bp | 923bp | Scaffold000135 | 88641bp | 89566bp | 925bp | -2bp | 30.8cM | GGTATCTCGCGTGACTCCAT | AGATTTCCTCCACGAACACG |
| RI05747 | 001-030-A05 | AL663017 | OSJNBa0060P14 | 95520bp | 96607bp | 1087bp | Scaffold003436 | 12569bp | 13657bp | 1088bp | -1bp | 70.1-70.6cM | GAAAACGATCTGTGAGGGACA | TGTTCATCATCACCCGTACC |
| RI05644 | J013159E18 | AL606594 | OSJNBa0029H02 | 33086bp | 33443bp | 357bp | Scaffold001642 | 8811bp | 9166bp | 355bp | 2bp | 76.8cM | GAAGGTGGGGATCGGATAAT | AAGGAGCTGACCTTCACCAA |
| RI05738 | J033126A02 | AL607001 | OSJNBa0088I22 | 113100bp | 113390bp | 290bp | Scaffold002800 | 32942bp | 33231bp | 289bp | 1bp | 87.1-94.4cM | TTACATGCCATTTGGAGGAG | TGTGATAGCCTTGAGGGAACA |
| RI05721 | J013104E10 | AL606650 | OSJNBb0015D13 | 16154bp | 16841bp | 687bp | Scaffold008253 | 10991bp | 11685bp | 694bp | -7bp | 109.9cM | TATGTGCTGGACGAGGAGTC | TGACGAGGCTCATGTTGTTC |
| RI05764 | J023133I21 | AL662988 | OSJNBa0089N06 | 117404bp | 117616bp | 212bp | Scaffold001612 | 36303bp | 36513bp | 210bp | 2bp | 109.9cM | CCTCAGATCCATGGAGAAGC | AGAGGGTCACCAGGCTGAG |
| RI05765 | J023133I21 | AL662988 | OSJNBa0089N06 | 117598bp | 117892bp | 294bp | Scaffold001612 | 36495bp | 36791bp | 296bp | -2bp | 109.9cM | CTCAGCCTGGTGACCCTCT | CACACGTCCTCGATGTGG |
| RI05766 | J013104E10 | AL662988 | OSJNBa0089N06 | 138942bp | 139243bp | 301bp | Scaffold008253 | 10649bp | 10952bp | 303bp | -2bp | 109.9cM | ACGAAGAAGGAAGCTTCGAC | CCGACGATGTTATGATCACG |
| RI05632 | J013122D02 | AL606454 | OSJNBa0033G05 | 131567bp | 132625bp | 1058bp | Scaffold001106 | 8834bp | 9886bp | 1052bp | 6bp | 111.3-113.2cM | GCGACAAGAGGAAGAAGGAA | AGCTTCCTCACGTCCAGAAC |
| RI05633 | J013122D02 | AL606454 | OSJNBa0033G05 | 136518bp | 136935bp | 417bp | Scaffold001106 | 14552bp | 14967bp | 415bp | 2bp | 111.3-113.2cM | CCACTCCTTGGTGGATCTGT | GGTAATGCTGGGCACTTTGT |
| RI05634 | J013122D02 | AL606454 | OSJNBa0033G05 | 137290bp | 137575bp | 285bp | Scaffold001106 | 15322bp | 15609bp | 287bp | -2bp | 111.3-113.2cM | TGGAGTTGCACTCTATCAAACC | TTTGTTTGCCACCATTTCC |
| RI05635 | J013122D02 | AL606454 | OSJNBa0033G05 | 138286bp | 139088bp | 802bp | Scaffold001106 | 16328bp | 17129bp | 801bp | 1bp | 111.3-113.2cM | AGGATCTGGGAGCTGGACTT | CGGCCTAAGGAGCACATATT |
| RI05636 | J023074O21 | AL606454 | OSJNBa0033G05 | 66588bp | 66896bp | 308bp | Scaffold004173 | 23046bp | 23353bp | 307bp | 1bp | 111.3-113.2cM | GCCGGAAAAAGTACAACACC | CACCGTCAGATTGCCTTGT |
| RI05637 | J013026G17 | AL606455 | OSJNBb0079B02 | 30838bp | 31133bp | 295bp | Scaffold002099 | 40357bp | 40637bp | 280bp | 15bp | 111.3-113.2cM | GACAGAGCTATTGGTGCTGACA | TAGCTCATATTGGCGTGGTG |
| RI05713 | J023056A15 | AL606649 | OSJNBb0003B01 | 134510bp | 135150bp | 640bp | Scaffold002099 | 16931bp | 17588bp | 657bp | -17bp | 111.3-113.2cM | GGTGCCTTCGTGAAGGATTT | TAGTGAGGGTGATGGGGATG |
| RI05714 | J023056A15 | AL606649 | OSJNBb0003B01 | 135618bp | 135922bp | 304bp | Scaffold002099 | 18056bp | 18364bp | 308bp | -4bp | 111.3-113.2cM | CTGAGGAGAACGAAGGTGATAGT | AACAGCGCGAGACAGAAGAC |
| RI05715 | J013123F09 | AL606649 | OSJNBb0003B01 | 137331bp | 137579bp | 248bp | Scaffold002099 | 19774bp | 20021bp | 247bp | 1bp | 111.3-113.2cM | GATGTTCCATTGGATGCACTT | AACCCTGGCATCAGCATTAG |
| RI05716 | J013088J07 | AL606649 | OSJNBb0003B01 | 145534bp | 146421bp | 887bp | Scaffold002099 | 27973bp | 28859bp | 886bp | 1bp | 111.3-113.2cM | ATTGCGATTCGGTTGACGTA | CAGGAAGTTGCCGCAGTT |
| RI05792 | 001-105-B07 | AL731607 | OSJNBa0063C18 | 28357bp | 29297bp | 940bp | Scaffold002338 | 34409bp | 35347bp | 938bp | 2bp | 111.3-113.2cM | GCTTATGTGACATTCAAGGAACC | TTGGTGTGTCCCAGAAATTG |
| RI05793 | J023133G05 | AL731607 | OSJNBa0063C18 | 6267bp | 7218bp | 951bp | Scaffold002338 | 11108bp | 12057bp | 949bp | 2bp | 111.3-113.2cM | TTGGCTCCACAAACTCAAGG | CGCCTTCTTCTGATTGGAGA |
| RI05641 | J013135P10 | AL606445 | OSJNBa0070O11 | 33635bp | 34015bp | 380bp | Scaffold001106 | 31109bp | 31488bp | 379bp | 1bp | 113.2cM | TTGGGCATGTCACTCACAAT | GAAAACGTGAAAAGCGATCC |
| RI05642 | J013135P10 | AL606445 | OSJNBa0070O11 | 34161bp | 34696bp | 535bp | Scaffold001106 | 31634bp | 32170bp | 536bp | -1bp | 113.2cM | TTTGCTGGAGAGGAAGGAGA | ATAAGGCCATTTGCCAACAC |
| RI05654 | J033119E14 | AL606635 | OSJNBa0010D21 | 128600bp | 129231bp | 631bp | Scaffold007651 | 14288bp | 14918bp | 630bp | 1bp | 113.2cM | CCCTGCTAAAGAAGGTCCAA | CCTTTGGAGATGCAAGTGCT |
| RI05655 | J013057F24 | AL606635 | OSJNBa0010D21 | 41324bp | 42293bp | 969bp | Scaffold007252 | 5005bp | 5711bp | 706bp | 263bp | 113.2cM | ACTGAGCTCCCAACATGTCC | TTGACCCACATTGAAACACA |
| RI05656 | J013075N15 | AL606635 | OSJNBa0010D21 | 50398bp | 51272bp | 874bp | Scaffold007252 | 13587bp | 14453bp | 866bp | 8bp | 113.2cM | TGGCTTGACGTCTCCTATGAC | TTGGCGTCCTGGTTAAAGAC |
| RI05657 | J013075N15 | AL606635 | OSJNBa0010D21 | 51575bp | 52162bp | 587bp | Scaffold007252 | 14756bp | 15341bp | 585bp | 2bp | 113.2cM | CTACAATCAACCCCCTCGTG | TTCTTCGATTTCTCTGGCTTTC |
| RI05726 | 002-117-B11 | AL606692 | OSJNBb0059K02 | 27184bp | 28280bp | 1096bp | Scaffold000093 | 77332bp | 78421bp | 1089bp | 7bp | 114cM | GTTCTTCCAGGCGAAGGAG | TGCCCGATGTCTTCAGCTAT |
| RI05727 | 002-153-G04 | AL606692 | OSJNBb0059K02 | 97249bp | 97754bp | 505bp | Scaffold000093 | 7639bp | 8141bp | 502bp | 3bp | 114cM | GCTCGACATCATCGAATCTG | GGGAGTTCTTGTTCGGCTTC |
| RI05651 | J013107K18 | AL606608 | OSJNBa0015K02 | 102926bp | 103230bp | 304bp | Scaffold005871 | 7462bp | 7758bp | 296bp | 8bp | 114.3-120.3cM | ATCTCGGGGTGGGTGTGT | CCACGAAGTCTCCATTTTCC |
| RI05652 | 002-152-C12 | AL606608 | OSJNBa0015K02 | 114646bp | 115169bp | 523bp | Scaffold004991 | 9709bp | 10234bp | 525bp | -2bp | 114.3-120.3cM | GTGGCACCTACAGCTTCTCG | ACGGTGGCTTGAGCTGAC |
| RI05653 | J013073I20 | AL606608 | OSJNBa0015K02 | 152690bp | 153160bp | 470bp | Scaffold002914 | 20324bp | 20793bp | 469bp | 1bp | 114.3-120.3cM | GGGATCTGAAGATGCTGAAAA | CTGGTTCATTGCTGCCATC |
| RI05676 | 001-027-H07 | AL606690 | OSJNBa0060D06 | 115025bp | 115284bp | 259bp | Scaffold000276 | 7021bp | 7278bp | 257bp | 2bp | 114.3cM | TCCACCTAATCCTTCGCAAC | CATCACAGGGGGCTTAACAG |
| RI05677 | 001-027-H07 | AL606690 | OSJNBa0060D06 | 115389bp | 115979bp | 590bp | Scaffold000276 | 7383bp | 8466bp | 1083bp | -493bp | 114.3cM | CCCTAGCTCAATTTGCAAGC | TGCCCTCAGCAGTTACTTCC |
| RI05678 | J013098P05 | AL606690 | OSJNBa0060D06 | 117534bp | 117829bp | 295bp | Scaffold000276 | 9692bp | 9988bp | 296bp | -1bp | 114.3cM | CATATCAGCCCTGGTCCTGT | ACCATGACCAAGGAGACGAG |
| RI05679 | J033068D06 | AL606690 | OSJNBa0060D06 | 122927bp | 123467bp | 540bp | Scaffold000276 | 15313bp | 15854bp | 541bp | -1bp | 114.3cM | GAGATTGGCATGTGGGAGTC | TAGCATGTTCAGCAGCGTTT |
| RI05680 | 001-042-A04 | AL606690 | OSJNBa0060D06 | 21561bp | 21861bp | 300bp | Scaffold001306 | 44367bp | 44666bp | 299bp | 1bp | 114.3cM | CAGCTGTCCCTGCAATTGAT | AGCATCATTCGCTCGTTGTA |
| RI05681 | 001-042-A04 | AL606690 | OSJNBa0060D06 | 25502bp | 25712bp | 210bp | Scaffold001306 | 40528bp | 40730bp | 202bp | 8bp | 114.3cM | GCTGCTCTTCCTCCAGCTC | TCGACAGGAAATCGATGATG |
| RI05682 | 002-129-C12 | AL606690 | OSJNBa0060D06 | 53255bp | 54037bp | 782bp | Scaffold001306 | 25806bp | 26587bp | 781bp | 1bp | 114.3cM | CAACGTTACGAGAGTTGGAATG | GTAACGGTGCAAGTCCCAAC |
| RI05683 | 002-129-C12 | AL606690 | OSJNBa0060D06 | 56126bp | 56873bp | 747bp | Scaffold001306 | 22969bp | 23718bp | 749bp | -2bp | 114.3cM | CTGCACACATGAGGACCACT | TCTCCACAAGTACGGGGATG |
| RI05684 | 001-206-F11 | AL606690 | OSJNBa0060D06 | 60426bp | 61466bp | 1040bp | Scaffold001306 | 18347bp | 19343bp | 996bp | 44bp | 114.3cM | GTCGAGCCCCCTCCACTT | AGCGCGTTGGTGTAGTTGTT |
| RI05685 | J023082K03 | AL606690 | OSJNBa0060D06 | 65396bp | 66158bp | 762bp | Scaffold001306 | 15004bp | 15759bp | 755bp | 7bp | 114.3cM | TCCAACAGAGAGCTCCAAAA | CGATCTGTGTTCTTCCAGCA |
| RI05686 | J023082K03 | AL606690 | OSJNBa0060D06 | 66170bp | 66921bp | 751bp | Scaffold001306 | 14245bp | 14992bp | 747bp | 4bp | 114.3cM | CCCCTGGAGGTCGAGAAT | AGACCCAACGTTGCATGG |
| RI05700 | J023148O14 | AL606685 | OSJNBa0071I13 | 42909bp | 43534bp | 625bp | Scaffold008638 | 5813bp | 6437bp | 624bp | 1bp | 114.3-120.3cM | CTGATAAGGTTGCAGGAGCAG | ATGCAGCATTGCATTCTTTG |
| RI05701 | J023148O14 | AL606685 | OSJNBa0071I13 | 43487bp | 44071bp | 584bp | Scaffold008638 | 5297bp | 5860bp | 563bp | 21bp | 114.3-120.3cM | ACCCTGCAAATGACATAGGG | AATTTCCGGTTCTGCAACAG |
| RI05702 | J033009N20 | AL606646 | OSJNBa0087O24 | 128837bp | 129731bp | 894bp | Scaffold000251 | 28167bp | 29062bp | 895bp | -1bp | 120.3-122.9cM | TGAGAAACGTGTCCAAGAACTG | AATGCTTTGCCGTTCAGATT |
| RI05703 | J033009N20 | AL606646 | OSJNBa0087O24 | 131379bp | 132135bp | 756bp | Scaffold000251 | 30710bp | 31468bp | 758bp | -2bp | 120.3-122.9cM | TCACATATGACATGGCAACAA | GGCATTCAAAAAGGCTGAAA |
| RI05704 | 002-173-G04 | AL606646 | OSJNBa0087O24 | 36107bp | 37091bp | 984bp | Scaffold007911 | 3387bp | 4372bp | 985bp | -1bp | 120.3-122.9cM | CAGCTCCTCGGATGAAGAAG | TGAAGAGCTTGTCGCTGGAC |
| RI05705 | 001-204-A11 | AL606646 | OSJNBa0087O24 | 49359bp | 49605bp | 246bp | Scaffold009521 | 4395bp | 4639bp | 244bp | 2bp | 120.3-122.9cM | TGATGAAAACACGCCCTTG | TGGAAGAAACACCAACACCA |
| RI05706 | J013069K23 | AL606646 | OSJNBa0087O24 | 55907bp | 56639bp | 732bp | Scaffold001781 | 39602bp | 40340bp | 738bp | -6bp | 120.3-122.9cM | ATTGGAATGGAAGGCACAGT | GGTGAGCAAGCAACTCTGAT |
| RI05707 | J033075I07 | AL606646 | OSJNBa0087O24 | 58314bp | 59132bp | 818bp | Scaffold001781 | 37114bp | 37929bp | 815bp | 3bp | 120.3-122.9cM | AAGCTGATGAATTCGGATGG | GTGCTTCCGTGATTTGCATT |
| RI05733 | J013129G21 | AL606999 | OSJNBa0084K01 | 115418bp | 116071bp | 653bp | Scaffold000872 | 50904bp | 51555bp | 651bp | 2bp | 120.3cM | CTTACAGTTCGCCATCATGC | TATCCTGTTGCCGTCTCGTT |
| RI05734 | J013129G21 | AL606999 | OSJNBa0084K01 | 116475bp | 116786bp | 311bp | Scaffold000872 | 51959bp | 52269bp | 310bp | 1bp | 120.3cM | GGCAATCTCTCTCAGCCTCA | CCCTCAACACAAGACCAAAA |
| RI05735 | 001-028-C08 | AL606999 | OSJNBa0084K01 | 25466bp | 26155bp | 689bp | Scaffold002914 | 8829bp | 9517bp | 688bp | 1bp | 120.3cM | AGGGAGATCCGTGGGTACTT | ACATTGAGATTGGGGAGCAG |
| RI05736 | 001-042-B09 | AL606999 | OSJNBa0084K01 | 75483bp | 75815bp | 332bp | Scaffold000872 | 10556bp | 10889bp | 333bp | -1bp | 120.3cM | GGGCACACCTGTTCTTCAAA | AAGTGCCCTCATTTGTTGCT |
| RI05737 | 001-042-B09 | AL606999 | OSJNBa0084K01 | 76974bp | 77659bp | 685bp | Scaffold000872 | 12048bp | 12731bp | 683bp | 2bp | 120.3cM | GGAGAAACCTACGGGGTGAT | AAGGCGAGATCAAAAGCTCA |
| RI05648 | 006-207-E09 | AL606619 | OSJNBa0043A12 | 119570bp | 119808bp | 238bp | Scaffold008422 | 2371bp | 2607bp | 236bp | 2bp | 122.9cM | ATCACTTCAGAAGGCGGTTG | GTCTTTGCCATTGTCAGTGC |
| RI05624 | 002-183-F01 | AL606457 | OSJNBa0018M05 | 104340bp | 104955bp | 615bp | Scaffold009744 | 5875bp | 6488bp | 613bp | 2bp | 123.8-128.5cM | CACGCTGAAGCAGTATCAGG | GTAGACGGTGAGGAGGAACG |
| RI05625 | J033126L11 | AL606457 | OSJNBa0018M05 | 110564bp | 111237bp | 673bp | Scaffold009120 | 2482bp | 3154bp | 672bp | 1bp | 123.8-128.5cM | TCCCCAAATTCACTCTCCAG | TTCAGCACGATCAGTTTTGG |
| RI05626 | J033104G02 | AL606457 | OSJNBa0018M05 | 132368bp | 133322bp | 954bp | Scaffold003355 | 10259bp | 11211bp | 952bp | 2bp | 123.8-128.5cM | GAACTTGAAGCTGGTTGCAATA | TGGCTACTGATGGGTCAACA |
| RI05627 | J013112I09 | AL606457 | OSJNBa0018M05 | 145766bp | 146041bp | 275bp | Scaffold003355 | 24059bp | 24333bp | 274bp | 1bp | 123.8-128.5cM | TGCTTGTCGTATTTGGTGGT | CCCCTTGTCGACACGATACT |
| RI05628 | J013112I09 | AL606457 | OSJNBa0018M05 | 147282bp | 148219bp | 937bp | Scaffold003355 | 25574bp | 26504bp | 930bp | 7bp | 123.8-128.5cM | TTGGAATGCTACTTGCGATG | TCAGGGTGATTCTCAGGAATG |
| RI05629 | J033076F14 | AL606457 | OSJNBa0018M05 | 66189bp | 66811bp | 622bp | Scaffold004632 | 21410bp | 22034bp | 624bp | -2bp | 123.8-128.5cM | TCTGATCTCCCTCACGTTCA | CAGCTCTTCTAGGGTCAAGCA |
| RI05630 | J023027O16 | AL606457 | OSJNBa0018M05 | 94876bp | 95136bp | 260bp | Scaffold011082 | 3160bp | 3419bp | 259bp | 1bp | 123.8-128.5cM | CAAGCTCATATACCCGAGTGG | CGGTGTAGAACCACTGGAAGA |
| RI05631 | J023027O16 | AL606457 | OSJNBa0018M05 | 95349bp | 96323bp | 974bp | Scaffold011082 | 1972bp | 2947bp | 975bp | -1bp | 123.8-128.5cM | GAGAACACCGTCGTCCAGA | GGGGTTCTTGATGTTGTGCT |
| RI05638 | 006-212-B10 | AL606456 | OSJNBb0017I01 | 59443bp | 59787bp | 344bp | Scaffold000016 | 7600bp | 7928bp | 328bp | 16bp | 123.8-128.5cM | ATTGGAAGGAGCAATCACCA | CGAGAGGCCTATCCATTCAC |
| RI05639 | J013096D14 | AL606456 | OSJNBb0017I01 | 80826bp | 81397bp | 571bp | Scaffold004832 | 13131bp | 13703bp | 572bp | -1bp | 123.8-128.5cM | AGAACGCATACCCGATGTTC | ACCCCCTATCTCCGTGTCTT |
| RI05640 | J013096D14 | AL606456 | OSJNBb0017I01 | 82612bp | 82945bp | 333bp | Scaffold004832 | 14919bp | 15243bp | 324bp | 9bp | 123.8-128.5cM | CGGGATACCGTGCTGATATT | ACAAGATTCCCACCCACAAA |
| RI05688 | J033097M07 | AL606668 | OSJNBa0064G10 | 116406bp | 116830bp | 424bp | Scaffold000016 | 89161bp | 89588bp | 427bp | -3bp | 123.8-128.5cM | CGCCTTCCAATTTGTGATGT | CCCAGCTCTTGCTAAATTGC |
| RI05689 | J033107J24 | AL606668 | OSJNBa0064G10 | 143060bp | 143666bp | 606bp | Scaffold000016 | 70200bp | 70807bp | 607bp | -1bp | 123.8-128.5cM | CAGTTTGCTCCTGGAAGCTC | AGTCCTCACTGGCACAGACC |
| RI05690 | J033030N24 | AL606668 | OSJNBa0064G10 | 24190bp | 25177bp | 987bp | Scaffold003506 | 28970bp | 29958bp | 988bp | -1bp | 123.8-128.5cM | CCGGGCTAATCGTATCATCA | TCAAAAACCATCACTTCAGCA |
| RI05691 | J023145I07 | AL606668 | OSJNBa0064G10 | 33018bp | 33777bp | 759bp | Scaffold003506 | 20519bp | 21118bp | 599bp | 160bp | 123.8-128.5cM | GCCGAGGAACCCTGTCTAC | AGAAACTGCGGGATGATGAA |
| RI05692 | J023022G06 | AL606668 | OSJNBa0064G10 | 91279bp | 91539bp | 260bp | Scaffold000016 | 114855bp | 115114bp | 259bp | 1bp | 123.8-128.5cM | TTTTGGCTGAGTGGGAAGAT | GCCTTTGCCATAGCATGAAG |
| RI05693 | J023030K02 | AL606668 | OSJNBa0064G10 | 91524bp | 91885bp | 361bp | Scaffold000016 | 114512bp | 114870bp | 358bp | 3bp | 123.8-128.5cM | CCTTGATCAGGTCAAAGTGGA | TCCCACTCAGCCAAAAAGAG |
| RI05694 | J023022G06 | AL606668 | OSJNBa0064G10 | 92349bp | 92618bp | 269bp | Scaffold000016 | 113780bp | 114048bp | 268bp | 1bp | 123.8-128.5cM | TGTCAAGGGACTTGAAGCAG | CGTGCAACACCTCTTTGATG |
| RI05695 | J023022G06 | AL606668 | OSJNBa0064G10 | 93358bp | 93631bp | 273bp | Scaffold000016 | 112763bp | 113040bp | 277bp | -4bp | 123.8-128.5cM | CCATGACTACCTCAGCGACA | GTGGGGCTCAAACAGAACAT |
| RI05717 | 001-047-F09 | AL606652 | OSJNBb0004A17 | 101757bp | 102340bp | 583bp | Scaffold002490 | 32360bp | 32941bp | 581bp | 2bp | 123.8cM | AGCTGGCAGATGAGAGCAAC | TCTTTCAGCACGGAGGTTTT |
| RI05718 | J023118M23 | AL606652 | OSJNBb0004A17 | 27783bp | 28821bp | 1038bp | Scaffold000022 | 63660bp | 64693bp | 1033bp | 5bp | 123.8cM | GTACGGGGTGTCCGTGGAT | CCAGGAATTACCAAGCCATC |
| RI05719 | J033032C09 | AL606652 | OSJNBb0004A17 | 80592bp | 81318bp | 726bp | Scaffold000022 | 115674bp | 116387bp | 713bp | 13bp | 123.8cM | TATCTCGCAAGGGCTCAAAT | ATAGGTGCACAGGCAGCAC |
| RI05720 | J033032C09 | AL606652 | OSJNBb0004A17 | 82558bp | 82934bp | 376bp | Scaffold000022 | 117627bp | 118090bp | 463bp | -87bp | 123.8cM | TTGACGTGTTTACCGGAATG | TCCCCAATTCCCTCAAGATA |
| RI05664 | J013151M09 | AL606641 | OSJNBa0032F06 | 103447bp | 104327bp | 880bp | Scaffold004713 | 14431bp | 15271bp | 840bp | 40bp | 128.5cM | ATATTGGGATTTGGGCGTGT | CCCCAACTTTGTGCAGTACC |
| RI05665 | J033120G14 | AL606641 | OSJNBa0032F06 | 104193bp | 104653bp | 460bp | Scaffold004713 | 15141bp | 15597bp | 456bp | 4bp | 128.5cM | CACCATGGTTAGCTGCTGGT | CTGACAGGAGTTGTGCGATT |
| RI05666 | J033101J11 | AL606641 | OSJNBa0032F06 | 104656bp | 104913bp | 257bp | Scaffold004713 | 15600bp | 15858bp | 258bp | -1bp | 128.5cM | GAATTTCCACCATAGCTGCTG | AGAGCCATTGAAATGCCAAC |
| RI05667 | J013001A17 | AL606641 | OSJNBa0032F06 | 119493bp | 120229bp | 736bp | Scaffold008199 | 12164bp | 12898bp | 734bp | 2bp | 128.5cM | CTGTTCCGAGGAACCTGAAG | TCACCTTCACGAGCTAACCAT |
| RI05668 | 002-113-E06 | AL606641 | OSJNBa0032F06 | 134615bp | 135518bp | 903bp | Scaffold000649 | 53594bp | 54519bp | 925bp | -22bp | 128.5cM | GTTGCTTCCGGTGAGAAGTG | TCCTTTGAACAAACCCAACA |
| RI05669 | 001-204-B01 | AL606641 | OSJNBa0032F06 | 134796bp | 135596bp | 800bp | Scaffold000649 | 53516bp | 54336bp | 820bp | -20bp | 128.5cM | TTTGGTGAATTTTGCAGGTG | CTTGAATTCCAACAACACTCCA |
| RI05670 | J023063D20 | AL606641 | OSJNBa0032F06 | 3364bp | 4087bp | 723bp | Scaffold005491 | 9615bp | 10339bp | 724bp | -1bp | 128.5cM | ATATTGCCGCCTCATATTGG | GGTGCTTCTTCCTCCTCCTC |
| RI05671 | 001-002-C04 | AL606641 | OSJNBa0032F06 | 69782bp | 70213bp | 431bp | Scaffold000427 | 51897bp | 52327bp | 430bp | 1bp | 128.5cM | GAGGAGGAGCGGAGTGGT | TTGTTCGGAAATCTTCACCAG |
| RI05672 | J013001C03 | AL606641 | OSJNBa0032F06 | 82562bp | 83203bp | 641bp | Scaffold000427 | 64654bp | 65294bp | 640bp | 1bp | 128.5cM | GCAAGTGCCAAGGAATCAGT | TCACGCAGTCTTGATCATCC |
| RI05708 | J023055J22 | AL606651 | OSJNBa0088H09 | 111185bp | 111417bp | 232bp | Scaffold003482 | 17038bp | 17269bp | 231bp | 1bp | 129.1cM | ATGAACTGGGGTGTTCCTGA | GCTGTGGCTGTTCTCAACAA |
| RI05709 | J023055J22 | AL606651 | OSJNBa0088H09 | 111638bp | 111850bp | 212bp | Scaffold003482 | 17490bp | 17703bp | 213bp | -1bp | 129.1cM | GGTGCTGATTGGATTGAAAGA | GAGCCTACTGATGAAGTGAGACC |
| RI05710 | J023055J22 | AL606651 | OSJNBa0088H09 | 113621bp | 114286bp | 665bp | Scaffold003482 | 19474bp | 20167bp | 693bp | -28bp | 129.1cM | GGAATGGGAGGAGGGCTA | ATCGCCTCAAGATAGGCATT |
| RI05711 | J013108D21 | AL606651 | OSJNBa0088H09 | 121725bp | 122042bp | 317bp | Scaffold003482 | 27581bp | 27894bp | 313bp | 4bp | 129.1cM | CAGAAGAGCCAGTCCGTGA | CGAACTGCGTGAGGATGAC |
| RI05712 | J013049M21 | AL606651 | OSJNBa0088H09 | 59389bp | 59837bp | 448bp | Scaffold001964 | 12956bp | 13403bp | 447bp | 1bp | 129.1cM | GGTGTCCCTCCTAACATCCA | AGTGACACTCTTGCCCAACC |
| RI05673 | 001-203-E10 | AL606637 | OSJNBa0039K24 | 129477bp | 130505bp | 1028bp | Scaffold001079 | 41287bp | 42310bp | 1023bp | 5bp | 129.6cM | GAGGGCCACCATCTGCTC | TCTGCTTCTTCAGCCAGCTC |
| RI05674 | 001-033-D09 | AL606637 | OSJNBa0039K24 | 19507bp | 19815bp | 308bp | Scaffold000056 | 25227bp | 25534bp | 307bp | 1bp | 129.6cM | TGGAGGGCATCGTGAGGT | TATCTCACCCAGCTCGCTTT |
| RI05675 | 001-044-B06 | AL606637 | OSJNBa0039K24 | 39047bp | 39333bp | 286bp | Scaffold000056 | 17368bp | 17642bp | 274bp | 12bp | 129.6cM | ACTCCATCGTGCGCTCAG | TGGCGCCACTCAAGTAAAC |
| RI05696 | J033103C22 | AL606686 | OSJNBa0070M12 | 42669bp | 43562bp | 893bp | Scaffold007311 | 9898bp | 10789bp | 891bp | 2bp | 129.6cM | TGGTTTGCAGGCCTTAATGT | AAGAACGATCCTTGGCAGAAT |
| RI05697 | J023069G19 | AL606686 | OSJNBa0070M12 | 6707bp | 7017bp | 310bp | Scaffold004181 | 26620bp | 26929bp | 309bp | 1bp | 129.6cM | AGAACTACCGCACCAACGTC | GATCCTCTCCCGCATCAATA |
| RI05698 | 006-211-C05 | AL606686 | OSJNBa0070M12 | 92987bp | 93499bp | 512bp | Scaffold000056 | 66540bp | 67051bp | 511bp | 1bp | 129.6cM | CCAATGGATGTTCTGGTCCT | TGAGGAGACAGCTCACTGATG |
| RI05699 | 006-211-C05 | AL606686 | OSJNBa0070M12 | 95123bp | 95750bp | 627bp | Scaffold000056 | 64281bp | 64911bp | 630bp | -3bp | 129.6cM | CAGTGCAGGGAATCATTTCA | TCCTCTCGTTGAGCTTAGGG |
| RI05722 | J023067I21 | AL606656 | OSJNBb0020J19 | 101233bp | 101768bp | 535bp | Scaffold000397 | 19753bp | 20287bp | 534bp | 1bp | 129.6cM | TGGTGGACCTGCAAAACTTC | CCCGCATCTCATCATTTGTA |
| RI05723 | J023058L06 | AL606656 | OSJNBb0020J19 | 96990bp | 97378bp | 388bp | Scaffold000397 | 15507bp | 15898bp | 391bp | -3bp | 129.6cM | CGTCCTGGTGGCTACTTTGT | TCCGTTGGCTTTCTGAAAAT |
| RI02169 | J013044B08 | AF480497 | BAC_24K23 | 165883bp | 166734bp | 851bp | Scaffold001310 | 1696bp | 2546bp | 850bp | 1bp | Unknown | TTGCACACTATGTCGATGACC | GGGTGTTATTTGAATTCCTTGG |
| RI02170 | 001-023-H07 | AF480497 | BAC_24K23 | 170062bp | 170758bp | 696bp | Scaffold005871 | 20700bp | 21395bp | 695bp | 1bp | Unknown | CTCTCCCTCACCCTCGACTC | ACTGAACAAGCAAGGCGATT |
| RI02171 | J013107K18 | AF480497 | BAC_24K23 | 176820bp | 177618bp | 798bp | Scaffold005871 | 13833bp | 14637bp | 804bp | -6bp | Unknown | ATGCGTTTGAGGGAAGAAGA | CAAGCTTTTGGCAAGCTGAT |
| RI02172 | J013107K18 | AF480497 | BAC_24K23 | 177805bp | 178441bp | 636bp | Scaffold005871 | 12983bp | 13646bp | 663bp | -27bp | Unknown | AGGATGGTGATGCTTTCAGC | ATCAAAGGAGGCATCTCCAG |
| RI02173 | J013107K18 | AF480497 | BAC_24K23 | 180163bp | 180602bp | 439bp | Scaffold005871 | 10821bp | 11261bp | 440bp | -1bp | Unknown | GCCTTGTCAAACTTGCTGATT | TAATATGGTGGGGCACAGGT |
| RI02174 | J023086C22 | AF480497 | BAC_24K23 | 25325bp | 25978bp | 653bp | Scaffold000081 | 30829bp | 31481bp | 652bp | 1bp | Unknown | TGGAGAGGAGCTGCTTTTTG | TGGTACTGGAAATGGTGGTG |
| RI02175 | J013170O13 | AF480497 | BAC_24K23 | 26799bp | 27094bp | 295bp | Scaffold000081 | 29712bp | 30008bp | 296bp | -1bp | Unknown | TATATCTGGGCACACCGTCA | CTATAGCAGCTGCCTCCACA |
| RI02176 | J013106M01 | AF480497 | BAC_24K23 | 42321bp | 42980bp | 659bp | Scaffold000081 | 13819bp | 14480bp | 661bp | -2bp | Unknown | AGGAGAACCTGGGAGGCTTA | CAAATCTTCCAACACCAGCAT |
| RI05645 | 001-104-B05 | OSJN01026 | OSJNBa0082I13 | 65023bp | 65335bp | 312bp | Scaffold004744 | 9272bp | 9586bp | 314bp | -2bp | Unknown | GCCAGTACCGCAGTAAACCA | ACTCACTGCGGTGATTTCAG |
| RI05802 | J023030G02 | OSJN01008 | OSJNBb0085L12 | 6242bp | 7331bp | 1089bp | Scaffold004366 | 25050bp | 26138bp | 1088bp | 1bp | Unknown | CAGCATTAAGGGAGGCAAAG | CGAAAATGCTATCCACCTCA |